References

Alexander, S. M., Provencher, J. F., Henri, D. A., Taylor, J. J., Lloren, J. I., Nanayakkara, L., et al. (2019). Bridging indigenous and science-based knowledge in coastal and marine research, monitoring, and management in canada. Environmental Evidence, 8(1), 1–24.

Beechie, T. J., Nicol, C., Fogel, C., Jorgensen, J., Thompson, J., Seixas, G., Chamberlin, J., Hall, J., Timpane-Padgham, B., Kiffney, P., Kubo, S., & Keaton, J. (2021). Modeling effects of habitat change and restoration alternatives on salmon in the chehalis river basin using a salmonid life-cycle model (NMFS-NWFSC-CR-2021-01). U.S. Department of Commerce, NOAA.

Caswell, H. (1997). Matrix methods for population analysis. In S. Tuljapurkar & H. Caswell (Eds.), Structured-population models in marine, terrestrial, and freshwater systems (pp. 19–58). Springer US. https://doi.org/10.1007/978-1-4615-6005-0_2

Davison, R. J., & Satterthwaite, W. H. (2016). Use of age and stage structured matrix models to predict life history schedules for semelparous populations. Natural Resource Modeling, 29(4), 538–558. https://doi.org/10.1111/nrm.12109

Halpern, B. S., & Fujita, R. (2013). Assumptions, challenges, and future directions in cumulative impact analysis. Ecosphere, 4, 1–11.

Houde, N. (2007). The six faces of traditional ecological knowledge: Challenges and opportunities for canadian co-management arrangements. Ecology and Society, 12(2).

Jarvis, L., Rosenfeld, J., Gonzalez-Espinosa, P., & Enders, E. (2023). A process framework for integrating stressor-response functions into cumulative effects models. Science of the Total Environment, XXX, 167456.

Jensen, D. W., Steel, E. A., Fullerton, A. H., & Pess, G. R. (2009). Impact of fine sediment on incubation survival of pacific salmon: A meta-analysis of published studies. Reviews in Fisheries Science, 17(3), 348–359. https://doi.org/10.1080/10641260902716954

Jorgensen, J. C., Nicol, C., Fogel, C., & Beechie, T. J. (2021). Identifying the potential of anadromous salmonid habitat restoration with life cycle models. Plos One, 16(9), e0256792.

Kendall, N. W., Unrein, J., Volk, C., Beauchamp, D. A., Fresh, K. L., & Quinn, T. P. (2023). Life cycle model reveals sensitive life stages and evaluates recovery options for a dwindling pacific salmon population. North American Journal of Fisheries Management, 43(1), 203–230.

Larned, S. T., & Schallenberg, M. (2019). Stressor-response relationships and the prospective management of aquatic ecosystems. New Zealand Journal of Marine and Freshwater Research, 53, 489–512.

MacPherson, L. M., Reilly, J. R., Neufeld, K. R., Sullivan, M. G., Paul, A. J., & Johnston, F. D. (2023). Prioritizing bull trout recovery actions using a novel cumulative effects modelling framework. Fisheries Management and Ecology, 1–17.

MacPherson, L., Sullivan, M., Reilly, J., & Paul, A. (2020). Alberta’s fisheries sustainability assessment: A guide to assessing population status, and quantifying cumulative effects using the joe modelling technique. Canadian Science Advisory Secretariat (CSAS).

Murray, A. M., Sullivan, M. G., & Acorn, J. (2012). A tribute to joseph schieser nelson, 1937–2011. Canadian Field-Naturalist, 125, 373–380.

Pearsall, et al. (2022). Nicola watershed RAMS final report 2022: Nicola basin chinook risk assessment final report. A process developed with the nicola collaborative research and technical committee.

Piet, G. J., Tamis, J. E., Volwater, J., Vries, P. de, Wal, J. T. van der, & Jongbloed, R. H. (2021). A roadmap towards quantitative cumulative impact assessments: Every step of the way. Science of The Total Environment, 784, 146847.

Pirotta, E., Thomas, L., Costa, D. P., Hall, A. J., Harris, C. M., Harwood, J., et al. (2022). Understanding the combined effects of multiple stressors: A new perspective on a longstanding challenge. Science of the Total Environment, 821, 153322.

Roni, P., Anders, P. J., Beechie, T. J., & Kaplowe, D. J. (2018). Review of tools for identifying, planning, and implementing habitat restoration for pacific salmon and steelhead. North American Journal of Fisheries Management, 38(2), 355–376.

Rosenfeld, J. S. (2017). Developing flow–ecology relationships: Implications of nonlinear biological responses for water management. Freshwater Biology, 62, 1305–1324.

Rosenfeld, J. S., Ayllón, D., Grant, J. W., Naman, S. M., Post, J. R., Matte, J.-M., et al. (2024). Determinants of productive capacity for stream salmonids. In J. Lobon-Cervia, P. Budy, & R. Gresswell (Eds.), Advances in the ecology of stream-dwelling salmonids (pp. 1–12). Springer Life Sciences.

Rosenfeld, J., Gonzalez-Espinosa, P., Jarvis, L., Enders, E., Bayly, M., Paul, A., MacPherson, L., Moore, J., Sullivan, M., Ulaski, M., et al. (2022). Stressor-response functions as a generalizable model for context dependence. Trends in Ecology & Evolution.

Schäfer, R. B., & Piggott, J. J. (2018). Advancing understanding and prediction in multiple stressor research through a mechanistic basis for null models. Global Change Biology, 24, 1817–1826.

Schaub, M., & Kéry, M. (2021). Integrated population models: Theory and ecological applications with r and JAGS. Academic Press.

Sorel, M. (2022). Informing salmon conservation with life cycle models that account for individual heterogeneity [PhD thesis]. University of Washington.

Sullivan, M. (2017). Adaptive management of athabasca rainbow trout; cumulative effects modelling and potential management actions. Alberta Environment; Parks; Fisheries Management Branch.

Van der Lee, A. S., & Koops, M. A. (2020). Recovery potential modelling of westslope cutthroat trout (oncorhynchus clarkii lewisi) in designatable unit 1: Saskatchewan-nelson river populations (Research Document 2020/020). Canadian Science Advisory Secretariat. https://www.dfo-mpo.gc.ca/csas-sccs/publications/resdocs-docrech/2020/2020_020-eng.html

Walters, C. (1997). Challenges in adaptive management of riparian and coastal ecosystems. Conservation Ecology [Online], 1(2), 1.

Ward, B. R., & Slaney, P. A. (1993). Egg-to-smolt survival and fry-to-smolt density dependence of keough river steelhead trout. Canadian Special Publication of Fisheries and Aquatic Sciences, 209–217.

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